Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830352.1_cds_XP_016504133.1_17609
CDS Infomation

[gene=LOC107822144] [db_xref=GeneID:107822144] [protein=protein SHORT-ROOT-like] [protein_id=XP_016504133.1] [location=26228..27553] [gbkey=CDS]
Sequence

ATGGAAAAAAGTCTTTTCTTTTCCAAACCTACAAATAATTTCTTAGTAACCAACTATGTT
CATCATTTGATAAACATGCAAAACCCTAATCAACAGCCTCATGAGAACTCATCAAGAAGT
CAATCACCAGAAAATGGTGATCCAGTTTCTGATGCCAAGTGGGCTTCTAGGCTTCTCCGG
GAGTGTGTTACCGCGATTTCTGAGAAAGATTCAACCAAGATCCATCACTTGTTATGGATG
TTAAATGAGCTTGCTTCTCCCTATGGTGATTGCAATCAAAAATTGGCATTTTATTTCTTG
CAAGCCCTTTTTTGTAAGGCCACTGATACTGGCTTGAGGTGTTACAAAACCCTAACTTCA
GCTGCTGAAAAGAGCAAATCTTTTGATTCATCTAGGAAATTGATCCTAAAGTTTCAAGAG
GTAAGTCCATGGACAACTTTTGGTCACGTTGCATCAAATGGTGCAATTTTAGAAGCATTA
GATGGTGAGAGTAAGCTTCATATAATTGATATAAGTCACACTTTTTGTACTCAATGGCCA
ACTTTACTAGAAGCTTTAGCCACGCGAAACGACGAAACACCACATCTAAAACTCACAGTT
GTTGTCACGGAAAGTACGTTAGTGAAATCAGTTATGAAAGAAGTAGCACAAAGAATGGAG
AAATTTGCTAGGTTAATGGGAGTGCCTTTTGAGTTCAATGTTTTAGGTGGATTGAACAAC
TTGAAAGAACTCACAAAGGAGAGTTTGAATATTAAAGAAGAAGAAGCAGTGGCAGTTAAT
TGCATTGGTGCCTTGAGAAAAGTTGAAGTAGAAGAAAGGGGAGATGTTATAAGAATTCTT
CAATCACTTAACCCTAAAGTTGTGACAATAGTAGAACATGAGGCTGATTTTTCTAGCACA
AGGAATGACTTTGTTAAGTGTTTTGAAGAATGCCTTAGGTTCTACACATTATACTTTGAG
ATGCTTGATGAAAGCTTTCCAATCACGAGCAACGAAAGGCTTGTGATCGAAAGGGAATGT
TCCAAAAGCATAGTTAAGGTTTTGGCTTGTGATGATCAAATTGGTGAAGGAGATGGTGAA
ACAAGAGAAAGAGGAAATCAATGGTCTGAAAGGCTTAGAGAGTTGTTTTCTCCATTTCCA
CTCAATGATGATGCTGTTGATGATGTTAAGTCCTTGCTTAAGAGATACAAGGCTGGATGG
TCACTTGTGCTACCACAAGAAAATCAAGAGTCACCTGGAATTTACTTGACTTGGAGAGAT
GAACCTGTGGTATGGACTTCAGCATGGAAACCCTGGGAAAAATCAATGGAGCGACATGAT
CAGTGA

Peptide Sequence

PEP ID

XP_016504133.1
PEP Infomation

PREDICTED: protein SHORT-ROOT-like [Nicotiana tabacum]
Sequence

MEKSLFFSKPTNNFLVTNYVHHLINMQNPNQQPHENSSRSQSPENGDPVSDAKWASRLLR
ECVTAISEKDSTKIHHLLWMLNELASPYGDCNQKLAFYFLQALFCKATDTGLRCYKTLTS
AAEKSKSFDSSRKLILKFQEVSPWTTFGHVASNGAILEALDGESKLHIIDISHTFCTQWP
TLLEALATRNDETPHLKLTVVVTESTLVKSVMKEVAQRMEKFARLMGVPFEFNVLGGLNN
LKELTKESLNIKEEEAVAVNCIGALRKVEVEERGDVIRILQSLNPKVVTIVEHEADFSST
RNDFVKCFEECLRFYTLYFEMLDESFPITSNERLVIERECSKSIVKVLACDDQIGEGDGE
TRERGNQWSERLRELFSPFPLNDDAVDDVKSLLKRYKAGWSLVLPQENQESPGIYLTWRD
EPVVWTSAWKPWEKSMERHDQ

Transcript Sequence

Gene sequence data has not been registered.